From Whitehead Institute for Biomedical Research:

CAMBRIDGE, Mass. (August 31, 2016) – Whitehead Institute scientists have developed a method to quickly isolate and systematically measure metabolite concentrations within the cellular organelles known as mitochondria, often referred to as the “powerhouses of the cell.” Prior attempts at such measurements have yielded unreliable results, either by taking too long to isolate mitochondria or by contaminating mitochondrial metabolites with contents from other cellular components.

“The advantage of this new method is that it offers a combination of both increased speed and specificity,” say Whitehead Member David Sabatini, who is also a Howard Hughes Medical Institute investigator and a professor of biology at MIT. “We are quite excited about applying this workflow in vivo and to other organelles such as lysosomes.”

Through precisely controlled chemical reactions, the mitochondria produce energy in the form of ATP and play a critical role in cellular homeostasis. Mitochondrial dysfunction is found in several disorders, including Parkinson’s disease, cardiovascular disease, and mitochondrial diseases. Until now, peering into the inner metabolic workings of these vital organelles has been challenging at worst and inaccurate at best.

One conventional method of profiling mitochondrial metabolites involves purifying mitochondria using several rounds of centrifugation, a process that can take more than an hour to complete. According to Walter Chen, a graduate student in Whitehead Member David Sabatini’s lab, time is a significant issue when studying metabolites.

“Even if you keep your sample at 4 degrees or 0 degrees Celsius to slow down any reactions, you’re still gradually getting distortion of the mitochondrial metabolite profile because the enzymes are still going and so are the transporters,” says Chen, who is also a third-year medical student at Massachusetts General Hospital. “As time goes on, the mitochondria are getting less happy outside the cell.”

The other commonly used method for profiling mitochondrial metabolites relies on abbreviated forms …

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